The Medicinal Chemists Notebook

Big things come in little packages

A recent article by a team in Genentech highlighted a RIPK1 inhibitor clinical candidate with GDC-8264 with a Ki (app) value of 710 pM. This candidate was derived from the HTS hit (Compound 1), which had it’s own outstanding potency for an HTS hit of 84 nM.

The team screened a library of 2.7M compounds leading to the discovery of this series and clinical candidate. If we look at the “tale-of-the-tape” it comes in something like this..

Properties Compound 1 GDC-8264 Delta
MW 285.12 271.11 -14.01
clogP 3.46 3.19 -0.27
HAC 18 20 +2
LE 0.55 0.79 +0.24
LLE 3.61 6.95 +3.34

This might be a record for the biggest change in potency with the smallest change in structure that I’ve seen.  With a mere +2 in HAC, the molecule dips into the pM range for potency.    A perfect ring-constrain (dare I say “microcycle?”) enabled by SBDD led to the breakthrough in the series.

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